Setup a new run:

If you already have set up a project, it is often useful to calculate structures starting e.g. from changed NOE lists or with different MD parameters. For that you can set up a new run within the same project. Basically most of the files will be copied from a given run (e.g. run1 will be copied to run2, together with the already calculated structures from iteration 0). ARIA will also change all the pathnames to fit the new run number.
Current ARIA program directory:           
Path of your project:                     
Run number you want to use as template:   
Highest iteration to copy:                
Copy the toppar files from:               
Copy the protocols from:                  
Run number of your new run:               


You have to specify absolute paths for all files and directories.


2. Please save the updated parameters somewhere in a directory as new.html:





3. Type ARIA on the UNIX command line in that directory where you have saved your new.html.