
description:

The prose program search for Prosite patterns in protein sequences.

usage:

prose [OPTION] FILE ...
prosite patterns search in protein sequences
example: prose seq.fasta

-h              print this message

pattern parameters:
                default search all patterns in prosite database
-p <pattern>    search <pattern>
-l <file>       obtain patterns from <file>, one per line
-s              include abundant patterns (/skip-flag set)

sequence files: all files have to be in fasta format.
-               takes the sequences from stdin.

platforms:

UNIX like platforms
The program was tested on Linux/Debian.

install:

see the INSTALL notes

